BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D06LP1|AL429731
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1795 0.0
>3x_Contig1770
Length = 29267
Score = 1795 bits (904), Expect = 0.0
Identities = 913/916 (99%), Gaps = 1/916 (0%)
Strand = Plus / Minus
Query: 1 gatcgttttgcttacttgcttacttgcttgccgttttctgtgtcttgtagcatgtgtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20942 gatcgttttgcttacttgcttacttgcttgccgttttctgtgtcttgtagcatgtgtgat 20883
Query: 61 gcgaatggtaatgaagcctttaaatagtttgggctttttaagggaagcaaagcgcggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20882 gcgaatggtaatgaagcctttaaatagtttgggctttttaagggaagcaaagcgcggcat 20823
Query: 121 gggggataaagaattaattttgggaaatgtgtttcaaaaataaattaattttgacgttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20822 gggggataaagaattaattttgggaaatgtgtttcaaaaataaattaattttgacgttac 20763
Query: 181 ctgcagttatttagtatggacataatacatagaagtagtcatgattgaaggacaaggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20762 ctgcagttatttagtatggacataatacatagaagtagtcatgattgaaggacaaggctg 20703
Query: 241 cccacaagggtagctctaattggtatcaatggaatggtctgagatgtaaaggtatacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20702 cccacaagggtagctctaattggtatcaatggaatggtctgagatgtaaaggtatacagg 20643
Query: 301 gattcagggcttttctaaaggcaaaataacaatgttaatcacgtgatagtcacgagactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20642 gattcagggcttttctaaaggcaaaataacaatgttaatcacgtgatagtcacgagactt 20583
Query: 361 gcagggtggcgaaagttttggagcccttttcatatataaagcacaagaggacaaaccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20582 gcagggtggcgaaagttttggagcccttttcatatataaagcacaagaggacaaaccaaa 20523
Query: 421 cgtgaaccgattaacagatgtatgamagaatatatgamatgctggagtaatggcccatta 480
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 20522 cgtgaaccgattaacagatgtatgaaagaatatatgaaatgctggagtaatggcccatta 20463
Query: 481 ggcttcgaataagtgaattacgtgggcattgagcaatgtttagaaacaattacgacgggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20462 ggcttcgaataagtgaattacgtgggcattgagcaatgtttagaaacaattacgacgggg 20403
Query: 541 atacggttactttttcaccaacaggtaggttattccaagtggaatacgccttggaagcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20402 atacggttactttttcaccaacaggtaggttattccaagtggaatacgccttggaagcta 20343
Query: 601 tcaaacagggttctgccacggtagggttaagatcaacgaagtacgctgtagtagtggcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20342 tcaaacagggttctgccacggtagggttaagatcaacgaagtacgctgtagtagtggcat 20283
Query: 661 tgaagcgtaacgctgatgaactttcatcataccagaagaaaattatcaaatgtgacgatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20282 tgaagcgtaacgctgatgaactttcatcataccagaagaaaattatcaaatgtgacgatc 20223
Query: 721 atttgggtgtatcgcttgctgggttagcaccagatgcaagagtgttgtcgaattatttga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20222 atttgggtgtatcgcttgctgggttagcaccagatgcaagagtgttgtcgaattatttga 20163
Query: 781 gacaacagtgcaattactcttctttgggtatataacaggaaattggcactagaaagagcc 840
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 20162 gacaacagtgcaattactcttcttt-ggtatataacaggaaattggcactagaaagagcc 20104
Query: 841 ggttacttgctgagtgataaggcacagaagaacacacagtcgtatggtggtagaccgtac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20103 ggttacttgctgagtgataaggcacagaagaacacacagtcgtatggtggtagaccgtac 20044
Query: 901 ggtgtgggtcttttgt 916
||||||||||||||||
Sbjct: 20043 ggtgtgggtcttttgt 20028
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5895
Number of Sequences: 1807
Number of extensions: 5895
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)